STRINGSTRING
Solyc03g043880.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g043880.2.1" - Branched-chain-amino-acid aminotransferase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g043880.2.1Branched-chain-amino-acid aminotransferase (418 aa)    
Predicted Functional Partners:
Solyc12g043020.1.1
Uncharacterized protein (615 aa)
   
  0.982
Solyc05g053540.2.1
Uncharacterized protein (611 aa)
   
  0.982
IPMS3
2-isopropylmalate synthase A-like (445 aa)
   
  0.954
IPMS1
2-isopropylmalate synthase B (612 aa)
   
  0.954
Solyc11g040390.1.1
Uncharacterized protein (819 aa)
   
 
  0.946
Solyc06g064550.2.1
Uncharacterized protein (919 aa)
   
 
  0.946
Solyc06g059850.1.1
Uncharacterized protein (380 aa)
   
  0.939
Solyc05g056480.2.1
Uncharacterized protein (467 aa)
   
  0.939
Solyc04g063350.2.1
Uncharacterized protein (472 aa)
   
  0.939
Solyc01g028900.2.1
Uncharacterized protein (358 aa)
   
  0.938
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (15%) [HD]