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STRINGSTRING
Solyc03g043920.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g043920.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g043920.2.1annotation not available (414 aa)    
Predicted Functional Partners:
101258640
ADP-glucose pyrophosphorylase family protein (415 aa)
           
  0.851
101266547
RNA-binding KH domain-containing protein (803 aa)
           
  0.777
101261703
Exostosin family protein (575 aa)
       
 
  0.496
101244612
annotation not available (883 aa)
           
  0.477
101249736
Uncharacterized protein; Golgin candidate 5 (1011 aa)
           
  0.465
101245312
Alkaline-phosphatase-like family protein (968 aa)
           
  0.451
543608
Beta-galactosidase (892 aa)
           
  0.440
101256314
Uncharacterized protein; Nudix hydrolase homolog 14 (307 aa)
           
  0.439
Solyc04g005030.2.1
Phosphoglucosamine mutase family protein (596 aa)
           
  0.439
101255053
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (133 aa)
           
  0.433
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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