STRINGSTRING
Solyc03g044030.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g044030.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g044030.1.1Uncharacterized protein (361 aa)    
Predicted Functional Partners:
cdc5
CDC5-like protein (987 aa)
     
  0.986
Solyc02g078970.2.1
Uncharacterized protein (570 aa)
     
  0.986
Solyc12g056080.1.1
Uncharacterized protein (693 aa)
     
  0.984
Solyc10g050500.1.1
Uncharacterized protein (69 aa)
     
  0.984
Solyc03g007850.1.1
Uncharacterized protein (673 aa)
     
  0.984
CRNKL1
Crooked neck-like protein 1 (664 aa)
     
  0.984
Solyc09g090660.2.1
Uncharacterized protein (521 aa)
     
  0.983
Solyc05g051070.2.1
Uncharacterized protein (310 aa)
     
  0.982
Solyc08g005190.2.1
Uncharacterized protein (920 aa)
     
  0.973
Solyc04g079920.2.1
Uncharacterized protein (597 aa)
     
  0.973
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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