Solyc03g044230.1.1 protein (Solanum lycopersicum)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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second shell of interactors

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.

Known Interactions

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experimentally determined

Predicted Interactions

gene neighborhood

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gene co-occurrence

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co-expression

protein homology

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[Homology]

Score

Solyc03g044230.1.1

Uncharacterized protein (379 aa)

Predicted Functional Partners:

Solyc03g120900.1.1

0.520

Solyc02g087300.1.1

0.520

Solyc11g032010.1.1

0.518

Solyc11g056380.1.1

0.507

Solyc09g092680.2.1

0.507

Solyc09g055810.1.1

0.507

Solyc05g053830.2.1

0.507

Solyc03g005380.2.1

0.507

Solyc02g021380.1.1

0.507

Solyc01g081070.2.1

0.507

Your Current Organism:

Solanum lycopersicum

NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato

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structured XML interaction data, according to the 'PSI-MI' data standard

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MFA: multi-fasta format - containing the aminoacid sequences in the network

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a tab-delimited file describing the names, domains and annotated functions of the network proteins

Browse interactions in tabular form:

node1	node2	node1 annotation	node2 annotation	score
Solyc01g081070.2.1	Solyc02g087300.1.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc01g081070.2.1	Solyc03g044230.1.1	Uncharacterized protein	Uncharacterized protein	0.507
Solyc01g081070.2.1	Solyc03g120900.1.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc02g021380.1.1	Solyc02g087300.1.1	Uncharacterized protein	Uncharacterized protein	0.973
Solyc02g021380.1.1	Solyc03g044230.1.1	Uncharacterized protein	Uncharacterized protein	0.507
Solyc02g021380.1.1	Solyc03g120900.1.1	Uncharacterized protein	Uncharacterized protein	0.973
Solyc02g087300.1.1	Solyc01g081070.2.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc02g087300.1.1	Solyc02g021380.1.1	Uncharacterized protein	Uncharacterized protein	0.973
Solyc02g087300.1.1	Solyc03g005380.2.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc02g087300.1.1	Solyc03g044230.1.1	Uncharacterized protein	Uncharacterized protein	0.520
Solyc02g087300.1.1	Solyc03g120900.1.1	Uncharacterized protein	Uncharacterized protein	0.801
Solyc02g087300.1.1	Solyc05g053830.2.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc02g087300.1.1	Solyc09g055810.1.1	Uncharacterized protein	Uncharacterized protein	0.973
Solyc02g087300.1.1	Solyc09g092680.2.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc02g087300.1.1	Solyc11g032010.1.1	Uncharacterized protein	Uncharacterized protein	0.974
Solyc02g087300.1.1	Solyc11g056380.1.1	Uncharacterized protein	Uncharacterized protein	0.973
Solyc03g005380.2.1	Solyc02g087300.1.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc03g005380.2.1	Solyc03g044230.1.1	Uncharacterized protein	Uncharacterized protein	0.507
Solyc03g005380.2.1	Solyc03g120900.1.1	Uncharacterized protein	Uncharacterized protein	0.994
Solyc03g044230.1.1	Solyc01g081070.2.1	Uncharacterized protein	Uncharacterized protein	0.507

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