STRINGSTRING
Solyc03g044910.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g044910.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g044910.1.1Uncharacterized protein (287 aa)    
Predicted Functional Partners:
Solyc05g054490.2.1
Uncharacterized protein (310 aa)
     
 
  0.493
Solyc02g090540.2.1
Uncharacterized protein (246 aa)
       
 
  0.469
Solyc02g065060.2.1
Uncharacterized protein (266 aa)
       
 
  0.469
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
 
  0.460
Solyc11g019950.1.1
Uncharacterized protein (486 aa)
       
 
  0.453
Solyc08g066020.1.1
Uncharacterized protein (511 aa)
       
 
  0.453
Solyc11g010550.1.1
Uncharacterized protein (968 aa)
       
      0.450
Solyc11g067020.1.1
Histone deacetylase (430 aa)
           
  0.436
Solyc03g115150.2.1
Uncharacterized protein (647 aa)
           
  0.436
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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