STRINGSTRING
Solyc03g046590.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g046590.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g046590.2.1Uncharacterized protein (801 aa)    
Predicted Functional Partners:
Solyc02g093810.2.1
Uncharacterized protein (725 aa)
     
   
  0.552
Solyc02g067990.2.1
Uncharacterized protein (733 aa)
     
   
  0.552
NMP1
Nuclear matrix protein 1 (331 aa)
           
  0.545
Solyc12g005050.1.1
Uncharacterized protein (427 aa)
     
   
  0.522
Solyc06g083100.1.1
Uncharacterized protein (597 aa)
           
  0.516
Solyc06g083090.2.1
Uncharacterized protein (615 aa)
           
  0.516
Solyc08g013990.2.1
Uncharacterized protein (289 aa)
           
  0.493
Solyc11g073190.1.1
Uncharacterized protein (302 aa)
           
  0.483
Solyc06g005290.2.1
Uncharacterized protein (346 aa)
           
  0.483
Solyc10g079740.1.1
Uncharacterized protein (305 aa)
           
  0.459
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (14%) [HD]