STRINGSTRING
Solyc03g058430.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g058430.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g058430.1.1Uncharacterized protein (378 aa)    
Predicted Functional Partners:
Solyc03g116730.2.1
Uncharacterized protein (387 aa)
   
   
  0.546
Solyc12g006930.1.1
Uncharacterized protein (421 aa)
           
  0.487
Solyc05g008570.1.1
Uncharacterized protein (394 aa)
           
  0.487
Solyc07g041210.2.1
Uncharacterized protein (695 aa)
           
  0.485
GPAT
Glycerol-3-phosphate acyltransferase (470 aa)
           
  0.483
Solyc03g097470.2.1
Uncharacterized protein (431 aa)
         
  0.470
Solyc12g008970.1.1
O-acyltransferase (463 aa)
           
  0.459
Solyc07g040740.2.1
O-acyltransferase (514 aa)
           
  0.459
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
     
   
  0.438
Solyc03g122120.2.1
Uncharacterized protein (558 aa)
     
   
  0.420
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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