STRINGSTRING
Solyc03g058940.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g058940.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g058940.2.1Uncharacterized protein (83 aa)    
Predicted Functional Partners:
Solyc00g042130.1.1
Annotation not available (704 aa)
   
 
  0.528
Solyc03g058930.2.1
Uncharacterized protein (107 aa)
   
          0.516
Solyc12g039010.1.1
Cytochrome c oxidase subunit 2 ; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (538 aa)
     
 
  0.502
Solyc03g063780.1.1
Uncharacterized protein (111 aa)
     
 
  0.496
Solyc01g109830.2.1
Bifunctional dihydrofolate reductase-thymidylate synthase ; Bifunctional enzyme. Involved in de novo dTMP biosynthesis. Key enzyme in folate metabolism (527 aa)
   
   
  0.488
Solyc12g035830.1.1
Cytochrome c oxidase subunit 2 ; Cytochrome c oxidase is the component of the respiratory chain that catalyzes the reduction of oxygen to water. Subunits 1- 3 form the functional core of the enzyme complex. Subunit 2 transfers the electrons from cytochrome c via its binuclear copper A center to the bimetallic center of the catalytic subunit 1 (280 aa)
       
 
  0.477
Solyc11g056410.1.1
Uncharacterized protein (234 aa)
       
 
  0.477
Solyc09g015870.2.1
Uncharacterized protein (131 aa)
       
 
  0.477
Solyc05g045930.1.1
Uncharacterized protein (151 aa)
       
 
  0.477
Solyc05g045870.1.1
Uncharacterized protein (133 aa)
       
 
  0.477
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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