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STRINGSTRING
Solyc03g059160.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g059160.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g059160.1.1annotation not available (242 aa)    
Predicted Functional Partners:
Solyc03g059150.2.1
annotation not available (196 aa)
 
          0.632
100736543
Lyk10 (617 aa)
           
  0.631
Rmc
annotation not available (525 aa)
           
  0.608
101249495
annotation not available (516 aa)
           
  0.578
SYMRK
Symbiosis receptor-like kinase ; Belongs to the protein kinase superfamily (903 aa)
           
  0.570
101257908
annotation not available (799 aa)
 
          0.556
Solyc02g089900.1.1
Protein kinase family protein / peptidoglycan-binding LysM domain-containing protein (645 aa)
           
  0.519
Solyc12g049320.1.1
annotation not available (267 aa)
           
  0.465
GRAS16
Uncharacterized protein; GRAS16 ; Belongs to the GRAS family (542 aa)
           
  0.465
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
   
   
  0.433
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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