STRINGSTRING
Solyc03g059160.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g059160.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g059160.1.1Uncharacterized protein (242 aa)    
Predicted Functional Partners:
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
     
  0.801
SlCaM4
Calmodulin (149 aa)
       
  0.673
Solyc12g055920.1.1
Uncharacterized protein (226 aa)
       
  0.673
Solyc12g015870.1.1
Uncharacterized protein (224 aa)
       
  0.673
Solyc12g009630.1.1
Uncharacterized protein (156 aa)
       
  0.673
Solyc11g072270.1.1
Uncharacterized protein (156 aa)
       
  0.673
Solyc11g072240.1.1
Calmodulin (149 aa)
       
  0.673
LOC543942
Regulator of gene silencing (198 aa)
       
  0.673
Solyc11g071750.1.1
Uncharacterized protein (116 aa)
       
  0.673
Solyc11g071740.1.1
Uncharacterized protein (201 aa)
       
  0.673
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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