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Solyc03g059270.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g059270.2.1" - C2H2-type zinc finger family protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g059270.2.1C2H2-type zinc finger family protein (342 aa)    
Predicted Functional Partners:
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.878
SAMT
S-adenosyl-L-methionine- salicylic acid carboxyl methyltransferase (361 aa)
           
  0.799
FIE
Fertilization-independent endosperm protein (372 aa)
       
 
  0.687
Solyc11g062010.1.1
Uncharacterized protein; P-loop containing nucleoside triphosphate hydrolases superfamily protein (2667 aa)
     
 
  0.621
Solyc08g067180.2.1
Uncharacterized protein; Ran BP2/NZF zinc finger-like superfamily protein (61 aa)
           
  0.582
101249483
ALC-interacting protein 1 (307 aa)
           
  0.562
Solyc09g064840.2.1
annotation not available (1391 aa)
       
      0.535
Solyc02g014130.1.1
annotation not available (1396 aa)
       
      0.535
101252637
MLO-like protein; May be involved in modulation of pathogen defense and leaf cell death (475 aa)
           
  0.517
Solyc04g049120.2.1
Uncharacterized protein; Duplicated homeodomain-like superfamily protein (1580 aa)
     
 
  0.515
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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