STRINGSTRING
Solyc03g059350.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g059350.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g059350.2.1Uncharacterized protein (135 aa)    
Predicted Functional Partners:
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
     
 
  0.718
Solyc11g072880.1.1
Uncharacterized protein (1061 aa)
   
 
  0.644
Solyc07g022780.2.1
Uncharacterized protein (366 aa)
   
 
  0.642
LCA1
Calcium-transporting ATPase, endoplasmic reticulum-type ; This magnesium-dependent enzyme catalyzes the hydrolysis of ATP coupled with the translocation of calcium from the cytosol to an endomembrane compartment (1048 aa)
   
 
  0.640
Solyc12g055920.1.1
Uncharacterized protein (226 aa)
       
 
  0.590
Solyc12g015870.1.1
Uncharacterized protein (224 aa)
       
 
  0.590
CBL1
Calcineurin B-like molecule (213 aa)
       
 
  0.590
CBL10
Calcineurin B-like 10; Calcineurin B-like molecule (257 aa)
       
 
  0.590
Solyc08g054570.1.1
Uncharacterized protein (186 aa)
       
 
  0.590
Solyc08g036590.1.1
Uncharacterized protein (229 aa)
       
 
  0.590
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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