STRINGSTRING
Solyc03g062910.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g062910.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g062910.2.1Uncharacterized protein (168 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
  0.961
Solyc07g005880.2.1
Uncharacterized protein (1012 aa)
   
  0.930
Solyc02g091120.2.1
DNA ligase (1473 aa)
     
  0.908
Solyc08g068120.1.1
Uncharacterized protein (1451 aa)
   
  0.879
Solyc09g009340.1.1
Uncharacterized protein (731 aa)
   
  0.826
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
  0.807
Solyc09g018710.2.1
Uncharacterized protein (410 aa)
   
  0.791
Solyc09g018690.2.1
Uncharacterized protein (507 aa)
   
  0.791
Solyc08g074610.1.1
Uncharacterized protein (550 aa)
   
  0.791
Solyc08g074600.2.1
Uncharacterized protein (214 aa)
   
  0.791
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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