STRINGSTRING
LOC543864 protein (Solanum lycopersicum) - STRING interaction network
"LOC543864" - Peroxisomal targeting signal type 2 receptor in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC543864Peroxisomal targeting signal type 2 receptor (316 aa)    
Predicted Functional Partners:
Solyc10g005650.2.1
Uncharacterized protein (744 aa)
     
  0.992
Solyc09g091470.2.1
Uncharacterized protein (465 aa)
       
 
  0.970
Solyc09g061840.2.1
Uncharacterized protein (456 aa)
       
 
  0.970
Solyc06g071470.2.1
Uncharacterized protein (527 aa)
       
 
  0.951
Solyc03g114330.2.1
Uncharacterized protein (399 aa)
       
 
  0.947
Solyc07g045350.2.1
Uncharacterized protein (404 aa)
       
 
  0.906
Solyc05g017760.2.1
Uncharacterized protein (407 aa)
       
 
  0.906
Solyc04g015100.2.1
Uncharacterized protein (411 aa)
       
 
  0.906
Solyc02g063490.2.1
Malate dehydrogenase (352 aa)
       
 
  0.635
Solyc11g012730.1.1
Uncharacterized protein (212 aa)
       
      0.625
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (18%) [HD]