STRINGSTRING
Solyc03g063220.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g063220.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g063220.1.1Uncharacterized protein (1608 aa)    
Predicted Functional Partners:
Solyc01g079210.2.1
Uncharacterized protein (451 aa)
     
  0.986
Solyc04g009830.2.1
Uncharacterized protein (360 aa)
       
  0.961
Solyc03g033480.2.1
Uncharacterized protein (171 aa)
       
 
  0.934
Solyc06g043170.2.1
Uncharacterized protein (716 aa)
       
  0.930
Solyc06g007480.2.1
Uncharacterized protein (124 aa)
       
  0.928
Solyc11g069370.1.1
RuvB-like helicase (455 aa)
     
  0.909
Solyc06g062350.2.1
RuvB-like helicase (455 aa)
     
  0.909
Solyc03g032070.2.1
RuvB-like helicase (469 aa)
     
  0.902
Solyc04g077290.1.1
Uncharacterized protein (274 aa)
     
  0.888
Solyc02g084000.2.1
Uncharacterized protein (268 aa)
     
  0.888
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: medium (77%) [HD]