STRINGSTRING
Solyc03g063600.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g063600.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g063600.2.1Uncharacterized protein (402 aa)    
Predicted Functional Partners:
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
     
 
  0.978
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
   
  0.968
Solyc08g079020.2.1
Uncharacterized protein (182 aa)
   
 
  0.949
Solyc04g077970.2.1
Uncharacterized protein (266 aa)
   
 
  0.949
Solyc00g009060.2.1
Annotation not available (199 aa)
         
  0.944
Solyc04g051350.2.1
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (808 aa)
       
  0.935
Solyc04g012060.2.1
Ribonucleoside-diphosphate reductase ; Provides the precursors necessary for DNA synthesis. Catalyzes the biosynthesis of deoxyribonucleotides from the corresponding ribonucleotides (808 aa)
       
  0.935
Solyc12g049370.1.1
Nucleoside diphosphate kinase (172 aa)
       
  0.933
Solyc08g008340.2.1
Nucleoside diphosphate kinase (234 aa)
       
  0.933
Solyc06g071960.2.1
Nucleoside diphosphate kinase (224 aa)
       
  0.933
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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