STRINGSTRING
Solyc03g063860.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g063860.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g063860.1.1Uncharacterized protein (144 aa)    
Predicted Functional Partners:
Solyc08g076220.2.1
Phosphoribulokinase (400 aa)
   
  0.943
Solyc05g010340.2.1
Uncharacterized protein (653 aa)
   
  0.943
Solyc04g005150.2.1
Uncharacterized protein (175 aa)
   
  0.943
Solyc03g114580.2.1
Uncharacterized protein (583 aa)
   
  0.943
Solyc12g062870.1.1
Uncharacterized protein (410 aa)
       
  0.855
Solyc10g037910.1.1
Uncharacterized protein (235 aa)
       
  0.855
Solyc07g055200.2.1
Uncharacterized protein (437 aa)
       
  0.855
Solyc06g082640.2.1
Uncharacterized protein (225 aa)
       
  0.855
Solyc05g051050.2.1
Uncharacterized protein (466 aa)
       
  0.855
Solyc04g025600.1.1
Uncharacterized protein (107 aa)
       
  0.855
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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