STRINGSTRING
Solyc03g065340.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g065340.2.1" - Alpha-1,4 glucan phosphorylase in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g065340.2.1Alpha-1,4 glucan phosphorylase ; Phosphorylase is an important allosteric enzyme in carbohydrate metabolism. Enzymes from different sources differ in their regulatory mechanisms and in their natural substrates. However, all known phosphorylases share catalytic and structural properties (966 aa)    
Predicted Functional Partners:
Solyc07g064830.2.1
Uncharacterized protein (903 aa)
 
  0.997
Solyc04g082400.2.1
Uncharacterized protein (844 aa)
 
  0.997
Solyc09g009190.2.1
Uncharacterized protein (876 aa)
 
  0.996
Solyc04g045340.2.1
Uncharacterized protein (583 aa)
   
 
  0.991
Solyc03g006870.2.1
Uncharacterized protein (632 aa)
   
 
  0.991
Solyc02g088000.2.1
Starch synthase, chloroplastic/amyloplastic (768 aa)
 
 
  0.972
Solyc07g042830.2.1
Starch synthase VI (614 aa)
 
 
  0.972
Solyc08g015670.2.1
Uncharacterized protein (464 aa)
 
 
  0.972
AGP-S2
Glucose-1-phosphate adenylyltransferase ; This protein plays a role in synthesis of starch. It catalyzes the synthesis of the activated glycosyl donor, ADP- glucose from Glc-1-P and ATP (518 aa)
 
 
  0.971
Solyc04g082090.2.1
Alpha-amylase (407 aa)
   
  0.971
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (7%) [HD]