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Solyc03g070470.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g070470.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g070470.1.1Uncharacterized protein; GNOM-like 2 (1532 aa)    
Predicted Functional Partners:
101268712
annotation not available (686 aa)
     
   
  0.868
Solyc03g007610.2.1
annotation not available (715 aa)
     
   
  0.868
CNOT1
Uncharacterized protein; Transcription regulators (2411 aa)
     
        0.846
101264027
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1219 aa)
     
 
  0.829
101251283
Coatomer subunit alpha; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network (1218 aa)
     
 
  0.829
101253454
Uncharacterized protein; Syntaxin of plants 72; Belongs to the syntaxin family (263 aa)
     
   
  0.800
Solyc12g038200.1.1
annotation not available (519 aa)
     
 
  0.789
101263943
Coatomer subunit gamma; The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non- clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins (886 aa)
     
 
  0.789
Solyc01g058380.1.1
annotation not available (217 aa)
     
 
  0.789
Solyc05g044610.1.1
Transducin family protein / WD-40 repeat family protein (1864 aa)
     
   
  0.748
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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