STRINGSTRING
Solyc03g071720.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g071720.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g071720.2.1Uncharacterized protein (320 aa)    
Predicted Functional Partners:
Solyc12g044900.1.1
Protein SEY1 homolog ; Probable GTP-binding protein that may be involved in cell development (786 aa)
       
      0.703
Solyc03g121590.2.1
Protein SEY1 homolog ; Probable GTP-binding protein that may be involved in cell development (815 aa)
       
      0.703
Solyc02g030450.2.1
Protein SEY1 homolog ; Probable GTP-binding protein that may be involved in cell development (799 aa)
       
      0.703
Solyc07g062180.2.1
Uncharacterized protein (364 aa)
         
  0.663
Solyc02g068430.2.1
Uncharacterized protein (309 aa)
       
      0.576
Solyc07g017770.2.1
Uncharacterized protein (402 aa)
         
  0.493
Solyc08g068570.2.1
Uncharacterized protein (498 aa)
           
  0.491
Solyc10g084540.1.1
Uncharacterized protein (1563 aa)
       
 
  0.482
Solyc09g005910.2.1
Uncharacterized protein (892 aa)
       
 
  0.482
Solyc04g079100.2.1
Uncharacterized protein (965 aa)
       
 
  0.482
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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