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STRINGSTRING
Solyc03g071870.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g071870.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g071870.1.1annotation not available (172 aa)    
Predicted Functional Partners:
101261512
Laccase; Lignin degradation and detoxification of lignin-derived products; Belongs to the multicopper oxidase family (567 aa)
     
   
  0.808
Solyc12g044330.1.1
annotation not available (248 aa)
     
   
  0.806
101248647
annotation not available (217 aa)
           
  0.797
Solyc01g100090.1.1
annotation not available (206 aa)
           
  0.797
101262919
Uncharacterized protein; Trans-cinnamate 4-monooxygenase ; Belongs to the cytochrome P450 family (528 aa)
     
   
  0.738
101244562
annotation not available (199 aa)
           
  0.620
101257313
Chalcone and stilbene synthase family protein; Belongs to the chalcone/stilbene synthases family (383 aa)
           
  0.513
Solyc01g090600.2.1
annotation not available (358 aa)
           
  0.513
101257961
annotation not available (579 aa)
     
        0.501
101250635
annotation not available (357 aa)
     
   
  0.468
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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