STRINGSTRING
Solyc03g078020.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g078020.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g078020.2.1Uncharacterized protein (283 aa)    
Predicted Functional Partners:
Solyc12g100070.1.1
Uncharacterized protein (196 aa)
   
 
  0.957
Solyc07g066280.2.1
Uncharacterized protein (367 aa)
   
 
  0.957
Solyc12g062630.1.1
Uncharacterized protein (134 aa)
   
 
  0.845
Solyc00g026870.1.1
Annotation not available (465 aa)
 
 
  0.818
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
 
  0.817
Solyc10g080160.1.1
Uncharacterized protein (385 aa)
 
 
  0.770
Solyc09g092090.2.1
Uncharacterized protein (204 aa)
 
 
  0.756
Solyc08g079490.2.1
Uncharacterized protein (280 aa)
     
  0.745
Solyc08g007490.2.1
Uncharacterized protein (250 aa)
     
  0.745
Solyc11g068820.1.1
Uncharacterized protein (206 aa)
   
 
  0.742
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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