STRINGSTRING
Solyc03g078040.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g078040.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g078040.1.1Uncharacterized protein (308 aa)    
Predicted Functional Partners:
Solyc01g094290.2.1
Uncharacterized protein (1198 aa)
     
 
  0.724
Solyc04g006930.2.1
Uncharacterized protein (800 aa)
     
    0.712
Solyc12g056160.1.1
Uncharacterized protein (790 aa)
     
 
  0.513
Solyc12g036260.1.1
Uncharacterized protein (777 aa)
     
 
  0.513
Solyc11g044260.1.1
Uncharacterized protein (345 aa)
     
 
  0.513
Solyc11g044250.1.1
Uncharacterized protein (362 aa)
     
 
  0.513
Solyc09g010530.2.1
Uncharacterized protein (798 aa)
     
 
  0.513
Solyc08g081820.2.1
Uncharacterized protein (664 aa)
     
 
  0.513
Solyc08g081810.2.1
Uncharacterized protein (802 aa)
     
 
  0.513
Solyc08g078880.2.1
Uncharacterized protein (835 aa)
     
 
  0.513
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]