STRINGSTRING
Solyc03g078280.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g078280.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g078280.1.1Uncharacterized protein (258 aa)    
Predicted Functional Partners:
ARG2
Arginase 2 (338 aa)
   
 
  0.599
ARG1
Arginase 1 (338 aa)
   
 
  0.599
Solyc03g036470.1.1
Uncharacterized protein (229 aa)
   
          0.520
Solyc07g054430.2.1
Uncharacterized protein (316 aa)
 
   
  0.516
Solyc07g054420.2.1
Uncharacterized protein (309 aa)
 
   
  0.516
Solyc01g009940.1.1
Uncharacterized protein (304 aa)
   
 
  0.481
Solyc05g014970.2.1
Urea amidohydrolase (834 aa)
           
  0.452
PRO2
Delta-1-pyrroline-5-carboxylate synthase Glutamate 5-kinase Gamma-glutamyl phosphate reductase; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants (720 aa)
           
  0.449
Solyc06g019170.2.1
Uncharacterized protein (717 aa)
           
  0.449
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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