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STRINGSTRING
Solyc03g078480.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g078480.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g078480.1.1annotation not available (127 aa)    
Predicted Functional Partners:
101248738
Leucine-rich repeat protein kinase family protein (682 aa)
       
 
  0.658
LOC543918
MAP3Ka (614 aa)
     
 
  0.610
109121373
annotation not available (827 aa)
     
   
  0.586
Solyc03g006730.1.1
annotation not available (1708 aa)
     
   
  0.586
Solyc02g079580.2.1
annotation not available (377 aa)
     
   
  0.586
101259524
annotation not available (1105 aa)
       
 
  0.585
101256935
annotation not available (604 aa)
       
 
  0.528
101262789
annotation not available (607 aa)
       
 
  0.528
101265334
Protein serine/threonine phosphatases;protein kinases;catalytics;cAMP-dependent protein kinase regulators;ATP binding;protein serine/threonine phosphatases (1080 aa)
     
 
  0.489
101262633
S-locus lectin protein kinase family protein (820 aa)
     
   
  0.471
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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