STRINGSTRING
Solyc03g080180.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g080180.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g080180.2.1Uncharacterized protein (357 aa)    
Predicted Functional Partners:
Solyc01g107590.2.1
Uncharacterized protein (357 aa)
     
 
  0.947
CCR1
Cinnamoyl-CoA reductase (332 aa)
   
  0.934
CCR2
Cinnamoyl-CoA reductase (332 aa)
   
  0.934
Solyc07g008360.1.1
Uncharacterized protein (568 aa)
     
 
  0.932
Solyc06g068650.2.1
Uncharacterized protein (543 aa)
     
 
  0.932
Solyc03g117870.2.1
Uncharacterized protein (545 aa)
     
 
  0.932
Solyc02g084570.2.1
Uncharacterized protein (521 aa)
     
 
  0.910
Solyc12g055820.1.1
Uncharacterized protein (527 aa)
         
  0.907
Eli3
ELI3 (359 aa)
         
  0.906
Solyc11g011330.1.1
Uncharacterized protein (356 aa)
         
  0.906
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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