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Solyc03g081300.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g081300.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g081300.2.1Uncharacterized protein; Plastid transcriptionally active 15 (492 aa)    
Predicted Functional Partners:
101254506
Uncharacterized protein; Pentatricopeptide repeat (PPR) superfamily protein (913 aa)
     
 
  0.682
101255042
Protein of unknown function (DUF177) (298 aa)
     
   
  0.648
101246579
Protein of unknown function (DUF177) (219 aa)
     
   
  0.635
101249346
Uncharacterized protein; Plastid transcriptionally active 6 (335 aa)
     
   
  0.627
Solyc04g051880.1.1
annotation not available (254 aa)
           
  0.610
101255083
Uncharacterized protein; Mitochondrial transcription termination factor family protein (392 aa)
           
  0.610
Solyc11g017430.1.1
Uncharacterized protein; Mitochondrial transcription termination factor family protein (200 aa)
           
  0.568
101246046
Uncharacterized protein; Plastid transcriptionally active 3 (891 aa)
     
 
  0.556
Solyc01g016930.1.1
annotation not available (81 aa)
     
 
  0.556
Solyc01g015200.1.1
annotation not available (120 aa)
     
 
  0.556
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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