STRINGSTRING
Solyc03g083330.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g083330.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g083330.2.1Uncharacterized protein (753 aa)    
Predicted Functional Partners:
Solyc00g036760.1.1
Annotation not available (321 aa)
     
   
  0.460
Solyc04g049720.2.1
Uncharacterized protein (544 aa)
 
   
  0.436
Solyc07g008520.2.1
Uncharacterized protein (584 aa)
 
          0.414
Solyc09g014230.1.1
Uncharacterized protein (568 aa)
 
          0.405
Solyc06g076750.2.1
Uncharacterized protein (655 aa)
 
          0.403
OPT1
LeOPT1 (585 aa)
 
          0.403
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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