STRINGSTRING
Solyc03g083390.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g083390.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g083390.2.1Uncharacterized protein (302 aa)    
Predicted Functional Partners:
Solyc01g103040.2.1
Uncharacterized protein (721 aa)
       
    0.530
RanBP1
Ran binding protein-1 (224 aa)
     
 
    0.524
Solyc06g082120.2.1
Uncharacterized protein (211 aa)
     
 
    0.524
Solyc06g066740.1.1
Uncharacterized protein (450 aa)
     
 
    0.524
Solyc03g120280.1.1
Uncharacterized protein (449 aa)
     
 
    0.524
Solyc01g104570.2.1
Uncharacterized protein (577 aa)
     
 
  0.521
Solyc01g104520.1.1
Uncharacterized protein (169 aa)
     
 
  0.521
Solyc05g014370.2.1
Uncharacterized protein (208 aa)
     
 
    0.519
Solyc11g007640.1.1
Uncharacterized protein (175 aa)
     
 
    0.518
Solyc05g012720.2.1
Uncharacterized protein (278 aa)
     
 
    0.518
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (16%) [HD]