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Solyc03g083530.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g083530.2.1" - Cytoplasmic ribosomal protein S13 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g083530.2.1Cytoplasmic ribosomal protein S13 (151 aa)    
Predicted Functional Partners:
Solyc11g021130.1.1
Ribosomal protein S7 (285 aa)
   
  0.999
rps3
30S ribosomal protein S3, chloroplastic (352 aa)
   
  0.999
Solyc04g049260.1.1
Uncharacterized protein (166 aa)
   
  0.998
Solyc04g074300.2.1
Uncharacterized protein (280 aa)
 
  0.998
Solyc04g063290.2.1
Uncharacterized protein (280 aa)
 
  0.998
Solyc11g005680.1.1
Uncharacterized protein (152 aa)
   
  0.998
Solyc06g073370.2.1
Uncharacterized protein (152 aa)
   
  0.998
Solyc03g078290.2.1
Uncharacterized protein (152 aa)
   
  0.998
Solyc09g082520.2.1
40S ribosomal protein S3a (260 aa)
   
  0.998
Solyc06g072490.2.1
40S ribosomal protein S3a (261 aa)
   
  0.998
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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