STRINGSTRING
Solyc03g093250.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g093250.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g093250.1.1Uncharacterized protein (647 aa)    
Predicted Functional Partners:
Solyc11g011370.1.1
Uncharacterized protein (1038 aa)
     
  0.999
Solyc02g067290.2.1
Uncharacterized protein (92 aa)
     
  0.998
Solyc02g087980.2.1
Structural maintenance of chromosomes protein (1246 aa)
   
0.998
Solyc07g049680.2.1
Uncharacterized protein (648 aa)
     
  0.996
Solyc10g079730.1.1
Condensin complex subunit 1 ; Regulatory subunit of the condensin complex, a complex required for conversion of interphase chromatin into mitotic-like condense chromosomes. The condensin complex probably introduces positive supercoils into relaxed DNA in the presence of type I topoisomerases and converts nicked DNA into positive knotted forms in the presence of type II topoisomerases (1400 aa)
     
  0.996
Solyc01g104570.2.1
Uncharacterized protein (577 aa)
     
  0.979
Solyc01g104520.1.1
Uncharacterized protein (169 aa)
     
  0.979
Solyc11g072820.1.1
Uncharacterized protein (1052 aa)
     
  0.963
Solyc10g086340.1.1
Uncharacterized protein (1044 aa)
     
  0.963
Solyc10g083310.1.1
Uncharacterized protein (1010 aa)
     
  0.963
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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