STRINGSTRING
EXPB2 protein (Solanum lycopersicum) - STRING interaction network
"EXPB2" - Beta expansin in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EXPB2Beta expansin (285 aa)    
Predicted Functional Partners:
Solyc04g076200.2.1
ER6 protein (152 aa)
           
  0.699
FZY5
Flavin monooxygenase-like protein (416 aa)
           
  0.693
FZY4
Flavin monooxygenase-like protein (411 aa)
           
  0.693
PIN10
Auxin efflux facilitator SlPIN10 (347 aa)
           
  0.692
PS-2
Dehiscence polygalacturonase (392 aa)
           
  0.650
PIN5
Auxin efflux facilitator SlPIN5 ; May act as a component of the auxin efflux carrier (358 aa)
           
  0.518
FZY
Flavin monooxygenase-like protein (410 aa)
           
  0.469
PIN4
Auxin efflux facilitator SlPIN4 ; May act as a component of the auxin efflux carrier (653 aa)
           
  0.469
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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