STRINGSTRING
Solyc03g093850.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g093850.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g093850.1.1Uncharacterized protein (609 aa)    
Predicted Functional Partners:
pcna
Proliferating cell nuclear antigen ; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase’s processibility during elongation of the leading strand (264 aa)
     
 
  0.944
Solyc12g035870.1.1
Uncharacterized protein (398 aa)
     
 
  0.940
Solyc01g111870.1.1
Uncharacterized protein (2728 aa)
     
 
  0.931
Solyc11g066790.1.1
Uncharacterized protein (1071 aa)
     
 
  0.913
Solyc07g055170.1.1
Uncharacterized protein (285 aa)
   
 
  0.891
Solyc11g072610.1.1
Uncharacterized protein (371 aa)
 
 
  0.880
Solyc10g079250.1.1
Putative recA protein (395 aa)
 
 
  0.877
Solyc07g066320.2.1
Uncharacterized protein (419 aa)
 
 
  0.877
Solyc05g055780.2.1
Uncharacterized protein (418 aa)
   
 
  0.857
Solyc11g073220.1.1
Uncharacterized protein (311 aa)
   
 
  0.852
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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