STRINGSTRING
Solyc03g094020.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g094020.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g094020.2.1Uncharacterized protein (849 aa)    
Predicted Functional Partners:
Solyc12g099660.1.1
Uncharacterized protein (638 aa)
     
  0.974
Solyc10g008100.2.1
Uncharacterized protein (202 aa)
     
  0.974
Solyc06g068700.2.1
Uncharacterized protein (532 aa)
     
  0.969
CNX61.0
Calnexin-like protein (538 aa)
     
  0.969
Solyc11g069400.1.1
Protein disulfide-isomerase (580 aa)
     
  0.807
Solyc11g019920.1.1
Uncharacterized protein (435 aa)
     
  0.807
Solyc07g021490.1.1
Uncharacterized protein (182 aa)
     
  0.807
Solyc06g075210.2.1
Uncharacterized protein (549 aa)
     
  0.807
Solyc06g065320.2.1
Uncharacterized protein (442 aa)
     
  0.807
Solyc06g060290.2.1
Protein disulfide-isomerase (438 aa)
     
  0.807
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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