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  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc03g094060.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g094060.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g094060.2.1annotation not available (295 aa)    
Predicted Functional Partners:
101248146
Protein-protein interaction regulator family protein (414 aa)
     
 
  0.892
Solyc09g065080.1.1
annotation not available (225 aa)
   
 
  0.886
Y14
RNA-binding protein 8A; RNA-binding (RRM/RBD/RNP motifs) family protein (195 aa)
     
 
  0.852
Solyc04g072680.1.1
annotation not available (578 aa)
     
 
  0.850
Solyc04g072670.2.1
annotation not available (760 aa)
     
 
  0.850
Solyc09g065090.1.1
annotation not available (215 aa)
     
 
  0.841
101252047
annotation not available (509 aa)
     
 
  0.841
Solyc04g049770.2.1
annotation not available (423 aa)
       
 
  0.796
UPF2
annotation not available (769 aa)
       
 
  0.796
Solyc11g033280.1.1
annotation not available (391 aa)
     
 
  0.794
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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