STRINGSTRING
Solyc03g095450.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g095450.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g095450.2.1Uncharacterized protein (438 aa)    
Predicted Functional Partners:
Solyc07g007380.2.1
Uncharacterized protein (316 aa)
     
  0.972
Solyc02g080380.2.1
Derlin ; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins (245 aa)
     
  0.969
Solyc08g082970.2.1
Uncharacterized protein (465 aa)
     
 
  0.911
Solyc08g008510.2.1
Uncharacterized protein (460 aa)
     
 
  0.911
Solyc12g006670.1.1
Uncharacterized protein (239 aa)
     
  0.898
Solyc05g013410.2.1
Uncharacterized protein (349 aa)
     
  0.898
Solyc03g118670.2.1
Uncharacterized protein (676 aa)
     
  0.898
Solyc01g106100.2.1
Uncharacterized protein (315 aa)
     
  0.898
Solyc01g007930.2.1
Uncharacterized protein (357 aa)
     
  0.898
Solyc05g012190.2.1
Uncharacterized protein (611 aa)
     
  0.892
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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