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STRINGSTRING
Solyc03g095690.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g095690.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g095690.2.1annotation not available (304 aa)    
Predicted Functional Partners:
101253956
Uncharacterized protein; CBF1-interacting co-repressor CIR, N-terminal;Pre-mRNA splicing factor (451 aa)
     
        0.692
Solyc01g099220.2.1
DNA polymerase; Recovery protein 3 (1947 aa)
   
 
  0.689
101260299
5’-3’ exonuclease family protein (1539 aa)
     
 
  0.665
BTAF1
annotation not available (1268 aa)
   
 
0.648
Solyc08g074520.1.1
annotation not available (656 aa)
     
 
  0.627
Solyc08g074510.1.1
annotation not available (176 aa)
     
 
  0.627
Solyc03g025280.2.1
annotation not available (947 aa)
     
        0.623
Solyc01g107510.2.1
DNA repair protein REV1; Deoxycytidyl transferase involved in DNA repair. Transfers a dCMP residue from dCTP to the 3’-end of a DNA primer in a template-dependent reaction. May assist in the first step in the bypass of abasic lesions by the insertion of a nucleotide opposite the lesion. Required for normal induction of mutations by physical and chemical agents (1045 aa)
   
 
  0.616
Solyc07g006820.2.1
annotation not available (1823 aa)
     
 
  0.596
101246334
AAA-type ATPase family protein (583 aa)
     
 
  0.584
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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