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STRINGSTRING
101258047 protein (Solanum lycopersicum) - STRING interaction network
"101258047" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
101258047annotation not available (476 aa)    
Predicted Functional Partners:
Solyc00g017880.1.1
annotation not available (1083 aa)
     
 
  0.593
Solyc10g006270.2.1
annotation not available (147 aa)
     
      0.586
Solyc08g078820.2.1
Autophagy-related protein; Autophagy 8f ; Belongs to the ATG8 family (198 aa)
     
      0.586
101265259
annotation not available (119 aa)
     
      0.586
100736468
Autophagy-related protein; Autophagy 8a ; Belongs to the ATG8 family (119 aa)
     
      0.586
101253062
Ubiquitin-like superfamily protein; Belongs to the ATG8 family (123 aa)
     
      0.586
101251945
annotation not available (123 aa)
     
      0.586
100736470
Autophagy-related protein; Autophagy 8h ; Belongs to the ATG8 family (119 aa)
     
      0.586
JMJ524
Uncharacterized protein; 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (398 aa)
       
 
  0.583
101245966
RNA helicase; P-loop containing nucleoside triphosphate hydrolases superfamily protein (597 aa)
       
 
  0.468
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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