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Solyc03g096080.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g096080.2.1" - Protein yippee-like in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g096080.2.1Protein yippee-like (129 aa)    
Predicted Functional Partners:
Solyc02g091720.1.1
Uncharacterized protein (386 aa)
     
 
  0.935
Solyc04g010120.2.1
Uncharacterized protein (425 aa)
     
 
  0.825
Solyc07g044850.2.1
Uncharacterized protein (580 aa)
     
 
  0.821
Solyc05g025510.2.1
Uncharacterized protein (580 aa)
     
 
  0.821
Solyc12g006300.1.1
Uncharacterized protein (255 aa)
     
 
  0.778
Solyc09g064320.2.1
Uncharacterized protein (241 aa)
     
 
  0.778
Solyc09g064310.2.1
Uncharacterized protein (257 aa)
     
 
  0.778
Solyc00g059100.2.1
Annotation not available (325 aa)
     
 
  0.778
Solyc03g033380.2.1
Uncharacterized protein (484 aa)
       
 
  0.740
Solyc03g006580.2.1
Uncharacterized protein (242 aa)
       
 
  0.727
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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