• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc03g096150.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g096150.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g096150.1.1annotation not available (91 aa)    
Predicted Functional Partners:
Solyc04g010120.2.1
LisH/CRA/RING-U-box domains-containing protein (425 aa)
     
 
  0.779
101249974
annotation not available (386 aa)
     
 
  0.754
Solyc12g006300.1.1
annotation not available (255 aa)
     
 
  0.617
101248217
annotation not available (580 aa)
     
 
  0.617
101258261
annotation not available (580 aa)
     
 
  0.617
Solyc00g059100.2.1
Transducin family protein / WD-40 repeat family protein (325 aa)
     
 
  0.617
101268452
annotation not available (484 aa)
       
 
  0.596
Solyc09g064320.2.1
annotation not available (241 aa)
     
 
  0.582
Solyc09g064310.2.1
annotation not available (257 aa)
     
 
  0.582
Solyc09g005010.2.1
annotation not available (1001 aa)
           
  0.559
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (10%) [HD]