STRINGSTRING
cdc20-1 protein (Solanum lycopersicum) - STRING interaction network
"cdc20-1" - Cell division control 20-1 in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cdc20-1Cell division control 20-1 (453 aa)    
Predicted Functional Partners:
Solyc02g079050.2.1
Uncharacterized protein (769 aa)
       
  0.994
Solyc04g082900.2.1
Uncharacterized protein (389 aa)
     
  0.992
Solyc12g014320.1.1
Uncharacterized protein (551 aa)
     
  0.990
Solyc03g061600.2.1
Uncharacterized protein (651 aa)
     
  0.990
Solyc03g113740.2.1
Uncharacterized protein (576 aa)
     
  0.990
Solyc05g007750.2.1
Uncharacterized protein (883 aa)
     
  0.990
Solyc06g048460.1.1
Uncharacterized protein (835 aa)
       
  0.988
Solyc08g067190.2.1
Uncharacterized protein (967 aa)
       
  0.988
Solyc05g014370.2.1
Uncharacterized protein (208 aa)
     
  0.988
Solyc01g067490.2.1
Uncharacterized protein (561 aa)
     
  0.988
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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