STRINGSTRING
Solyc03g097310.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g097310.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g097310.2.1Uncharacterized protein (450 aa)    
Predicted Functional Partners:
Solyc06g054100.1.1
Uncharacterized protein (122 aa)
   
          0.526
Solyc03g117700.1.1
Uncharacterized protein (292 aa)
   
          0.526
Solyc06g054110.1.1
Uncharacterized protein (170 aa)
   
          0.520
Solyc01g079470.2.1
Uncharacterized protein (124 aa)
   
          0.503
Solyc11g005340.1.1
Uncharacterized protein (256 aa)
   
          0.499
Solyc06g009630.1.1
Uncharacterized protein (127 aa)
   
          0.497
Solyc04g080870.1.1
Uncharacterized protein (86 aa)
   
          0.497
Solyc07g017770.2.1
Uncharacterized protein (402 aa)
   
          0.492
Solyc01g017520.1.1
Uncharacterized protein (82 aa)
   
          0.481
Solyc04g049130.2.1
Uncharacterized protein (400 aa)
   
          0.480
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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