• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc03g097400.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g097400.1.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g097400.1.1annotation not available (58 aa)    
Predicted Functional Partners:
101244901
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (749 aa)
       
 
  0.986
101260712
Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome (474 aa)
       
 
  0.981
101243735
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (935 aa)
       
 
  0.979
101258919
Uncharacterized protein; Spc97 / Spc98 family of spindle pole body (SBP) component (1221 aa)
       
 
  0.962
101263207
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (974 aa)
     
 
  0.958
101262474
Gamma-tubulin complex component; Gamma-tubulin complex is necessary for microtubule nucleation at the centrosome (707 aa)
       
 
  0.954
101257744
Uncharacterized protein; Transducin/WD40 repeat-like superfamily protein (787 aa)
     
 
  0.854
Solyc01g096780.2.1
annotation not available (307 aa)
           
  0.688
Solyc11g005690.1.1
Uncharacterized protein; Tetratricopeptide repeat (TPR)-containing protein (1342 aa)
           
  0.660
101253365
annotation not available (227 aa)
       
 
  0.632
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (12%) [HD]