STRINGSTRING
Solyc03g097460.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g097460.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g097460.2.1Uncharacterized protein (693 aa)    
Predicted Functional Partners:
Solyc06g071630.1.1
Uncharacterized protein (501 aa)
     
  0.920
Solyc01g090260.2.1
Uncharacterized protein (497 aa)
     
  0.895
Solyc01g090250.2.1
Uncharacterized protein (404 aa)
     
  0.895
Solyc03g111260.2.1
Uncharacterized protein (852 aa)
     
  0.883
Solyc07g049480.2.1
Uncharacterized protein (731 aa)
     
0.830
Solyc02g064620.2.1
Uncharacterized protein (915 aa)
     
 
  0.738
Solyc02g064610.2.1
Uncharacterized protein (283 aa)
     
 
  0.738
Solyc02g064600.2.1
Annotation not available (915 aa)
     
 
  0.738
Solyc02g064590.1.1
Annotation not available (283 aa)
     
 
  0.738
rpb2
DNA-directed RNA polymerase II subunit RPB2 ; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Second largest component of RNA polymerase II which synthesizes mRNA precursors and many functional non-coding RNAs. Proposed to contribute to the polymerase catalytic activity and forms the polymerase active center together with the largest subunit. Pol II is the central component of the basal RNA polymerase II transcription machinery. It is composed of mobile elements that move relative to each other. RPB2 is [...] (1191 aa)
     
 
  0.670
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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