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STRINGSTRING
Solyc03g098020.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g098020.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g098020.2.1annotation not available (408 aa)    
Predicted Functional Partners:
101245720
Uncharacterized protein; Diacylglycerol acyltransferase family (333 aa)
     
  0.936
101259139
Actin-like ATPase superfamily protein (522 aa)
       
    0.903
101248625
annotation not available (309 aa)
   
 
    0.900
Solyc10g079770.1.1
annotation not available (445 aa)
   
 
  0.749
101255254
annotation not available (826 aa)
   
 
  0.749
101258647
Uncharacterized protein; RAB GTPase homolog 7A (219 aa)
           
  0.687
101245117
Ras-related small GTP-binding family protein (200 aa)
           
  0.684
101246777
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val) (344 aa)
           
  0.680
101267438
Uncharacterized protein; NAD(P)-linked oxidoreductase superfamily protein (319 aa)
   
 
    0.653
Solyc00g015750.1.1
NAD(P)-linked oxidoreductase superfamily protein (315 aa)
   
 
    0.653
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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