STRINGSTRING
Solyc03g098140.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g098140.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g098140.2.1Uncharacterized protein (343 aa)    
Predicted Functional Partners:
Solyc08g081150.2.1
Uncharacterized protein (536 aa)
   
  0.999
Solyc07g006090.1.1
Uncharacterized protein (261 aa)
   
  0.987
Solyc01g106060.2.1
Uncharacterized protein (242 aa)
   
  0.987
Solyc10g079500.1.1
Inosine-5’-monophosphate dehydrogenase (497 aa)
   
  0.959
kdsA
3-desoxy-D-manno octulosonic acid-8-phosphate synthase (290 aa)
 
 
  0.943
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
  0.911
Solyc02g076720.2.1
Uncharacterized protein (1459 aa)
   
 
  0.894
Solyc01g107270.2.1
Uncharacterized protein (1333 aa)
   
 
  0.894
Solyc10g006980.2.1
Uncharacterized protein (296 aa)
 
     
  0.870
Solyc10g083710.1.1
Uncharacterized protein (426 aa)
 
     
  0.849
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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