STRINGSTRING
Solyc03g098310.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g098310.1.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g098310.1.1Uncharacterized protein (397 aa)    
Predicted Functional Partners:
Solyc06g053520.2.1
Uncharacterized protein (316 aa)
   
  0.973
spdsyn
Spermidine synthase (342 aa)
   
  0.973
Solyc04g026030.2.1
Uncharacterized protein (309 aa)
   
  0.973
SPM1
Putative spermine synthase (356 aa)
   
  0.973
ARG2
Arginase 2 (338 aa)
       
  0.955
ARG1
Arginase 1 (338 aa)
       
  0.955
Solyc08g014310.2.1
Uncharacterized protein (340 aa)
   
  0.947
pmt
Putrescine N-methyltransferase (340 aa)
   
  0.947
OAT
Ornithine aminotransferase (425 aa)
       
  0.946
CPA
N-carbamoylputrescine amidase ; Involved in polyamine biosynthesis (300 aa)
       
  0.905
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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