STRINGSTRING
Solyc03g110910.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g110910.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g110910.2.1Uncharacterized protein (565 aa)    
Predicted Functional Partners:
Solyc05g054630.2.1
Elongator complex protein 1 ; Acts as subunit of the RNA polymerase II elongator complex, which is a histone acetyltransferase component of the RNA polymerase II (Pol II) holoenzyme and is involved in transcriptional elongation (1314 aa)
     
  0.992
Solyc06g008310.2.1
Uncharacterized protein (825 aa)
     
  0.987
Solyc11g010950.1.1
Uncharacterized protein (360 aa)
     
  0.983
Solyc10g045400.1.1
Uncharacterized protein (404 aa)
     
 
  0.933
Solyc08g008250.1.1
Uncharacterized protein (250 aa)
     
 
  0.879
Solyc11g011780.1.1
Uncharacterized protein (502 aa)
     
   
  0.743
Solyc06g053800.1.1
Uncharacterized protein (505 aa)
     
   
  0.743
Solyc08g074590.2.1
Uncharacterized protein (229 aa)
     
 
  0.743
Solyc08g074580.2.1
Uncharacterized protein (128 aa)
     
 
  0.743
Solyc11g005860.1.1
Uncharacterized protein (654 aa)
     
 
  0.735
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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