• Version:
  • 11.0 (preview - - version 10.5 still available here)
STRINGSTRING
Solyc03g110920.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g110920.2.1" - annotation not available in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g110920.2.1annotation not available (191 aa)    
Predicted Functional Partners:
101245633
DNA-binding protein (241 aa)
           
  0.624
101253164
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (786 aa)
     
 
  0.607
101266805
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (815 aa)
     
 
  0.607
Solyc02g030450.2.1
Protein ROOT HAIR DEFECTIVE 3 homolog; Probable GTP-binding protein that may be involved in cell development (799 aa)
     
 
  0.607
101250793
Low temperature and salt responsive protein family (54 aa)
     
   
  0.584
101246861
Uncharacterized protein; Basic helix-loop-helix (bHLH) DNA-binding superfamily protein (195 aa)
           
  0.531
NAC-NOR
NAC domain protein (355 aa)
       
 
  0.488
101255149
Uncharacterized protein; Minichromosome maintenance 10 (415 aa)
     
   
  0.486
LOC544157
Late embryogenesis (Lea)-like protein (174 aa)
           
  0.485
101245464
Protein transport protein Sec61 subunit beta; Necessary for protein translocation in the endoplasmic reticulum (112 aa)
     
 
  0.468
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
Server load: low (9%) [HD]