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Solyc03g111130.1.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g111130.1.1" - Malate synthase in Solanum lycopersicum
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g111130.1.1Malate synthase (550 aa)    
Predicted Functional Partners:
LOC544276
Isocitrate lyase ; Involved in storage lipid mobilization during the growth of higher plant seedling (575 aa)
 
 
  0.999
Solyc07g017860.2.1
Uncharacterized protein (677 aa)
     
  0.965
Solyc02g094640.2.1
Acetyl-coenzyme A synthetase (631 aa)
     
  0.965
Solyc12g014180.1.1
Malate dehydrogenase (342 aa)
     
 
  0.956
Solyc09g091070.1.1
Malate dehydrogenase (298 aa)
     
 
  0.956
mMDH
Malate dehydrogenase (346 aa)
     
 
  0.956
Solyc03g115990.1.1
Uncharacterized protein (412 aa)
     
 
  0.956
Solyc02g063490.2.1
Malate dehydrogenase (352 aa)
     
 
  0.956
Solyc12g056940.1.1
Uncharacterized protein (2210 aa)
   
 
  0.952
mdh
Malate dehydrogenase (442 aa)
     
 
  0.951
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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