STRINGSTRING
Solyc03g111360.2.1 protein (Solanum lycopersicum) - STRING interaction network
"Solyc03g111360.2.1" - Uncharacterized protein in Solanum lycopersicum
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Solyc03g111360.2.1Uncharacterized protein (471 aa)    
Predicted Functional Partners:
Solyc10g007320.2.1
Uroporphyrinogen decarboxylase (420 aa)
       
  0.958
Solyc06g048730.2.1
Uroporphyrinogen decarboxylase (388 aa)
       
  0.958
Solyc03g005080.2.1
Uncharacterized protein (501 aa)
       
  0.943
Solyc01g079090.2.1
Uncharacterized protein (558 aa)
       
  0.943
Solyc10g005110.2.1
Uncharacterized protein (399 aa)
   
 
  0.848
Solyc03g083440.2.1
Uncharacterized protein (2226 aa)
         
  0.526
Solyc06g030580.2.1
Uncharacterized protein (181 aa)
 
   
  0.517
Solyc00g050030.1.1
Annotation not available (702 aa)
         
  0.506
Solyc01g107040.2.1
Uncharacterized protein (376 aa)
 
   
  0.500
Solyc06g030570.2.1
Uncharacterized protein (258 aa)
 
   
  0.490
Your Current Organism:
Solanum lycopersicum
NCBI taxonomy Id: 4081
Other names: Lycopersicon, Lycopersicon (Mill.) Seithe, Lycopersicon esculentum, Lycopersicon esculentum Mill., Lycopersicon esculentum var. esculentum, Lycopersicon lycopersicum, S. lycopersicum, Solanum esculentum, Solanum esculentum Dunal, Solanum lycopersicum, Solanum lycopersicum L., tomato
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